Ministry of Education
Siva Shanmugam N R
VIDWAN ID: 711853

Dr Siva Shanmugam N R

Male Doctor of Philosophy
Post-Doctoral Fellow
Tamil Nadu
Expertise: Biology
ORCID 0009-0009-2006-4099 Scopus 57203641423 ResearcherID IWU-9557-2023 Google Scholar G-bxqDwAAAAJ
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21 Publications
0 Projects
98 Scopus Citations
90 CrossRef
9 Years 5 Months Total Experience
Publications
21 Total
Articles
19
Chapters
2
Activity

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Scopus Scopus
98 Citations
6 h-index
CrossRef CrossRef
90 Citations
5 h-index
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Professional Recognition

Outstanding PostDoc Award
2026
University of Nebraska-Lincoln
DST-INSPIRE Fellow
2018
Department of Science and Technology
Post Doc Travel Award (GLBIO2024
2024
University of Nebraska–Lincoln
Institute Research Award (IR Award
2022
Indian Institute of Technology Madras
Best poster award in the 5th IITM-Tokyo Tech Joint Symposium
2020
IIT Madras
HTRA Fellowship
2017
IIT Madras
University First Rank in M.Tech (Intg
2015
Bharathidasan University
NCC Certificate – B and C (‘A’ Grade - Top Grade
2011
Directorate General of the National Cadet Corps

Community & Membership

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Personal Details

Doctor of Philosophy
2023
Indian Maritime University
Master of Technology
2015
NATIONAL COUNCIL FOR CEMENT AND BUILDING MATERIALS
Post-Doctoral Fellow
Jun 2023 – Present
Unknown Organization
Research Scholar
Jan 2017 – Feb 2023
Indian Institute of Technology, Madras | Department of Aerospace Engineering
Biological Sciences
Biology

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Organisation (0)

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Scholarly Work

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Scholarly Publications

dbCAN-HGM: CAZyme gene clusters in gut microbiomes of diverse human populations

Open Access
Journal Article
Nucleic Acids Research. Year: 2025. Volume: 54 , Issue: D1 , Pages: D555-D563 .
Authors: Yuchen Yan; Revanth Sai Kumar Reddy Patel; N R Siva Shanmugam; Jerry Akresi; Yanbin Yin
DOI 10.1093/nar/gkaf1185 Crossref Crossref: 1

Homology modeling identified for purported drug targets to the neuroprotective effects of levodopa and asiaticoside-D in degenerated cerebral ganglions of Lumbricus terrestris

Journal Article
Indian Journal of Pharmacology. Year: 2019. Volume: 51 , Issue: 1 , Pages: 31 .
Authors: Subaraja, M.; Kulandaisamy, A.; Siva Shanmugam, N.R.; Vanisree, A.J.
DOI 10.4103/ijp.IJP_600_18 Crossref Crossref: 2 Scopus Scopus: 3

ProCaff: Protein-carbohydrate complex binding affinity database

Open Access
Journal Article
Bioinformatics. Year: 2020. Volume: 36 , Issue: 11 , Pages: 3615-3617 .
Authors: Siva Shanmugam, N.R.; Jino Blessy, J.; Veluraja, K.; Michael Gromiha, M.
DOI 10.1093/bioinformatics/btaa141 Crossref Crossref: 15 Scopus Scopus: 15

Prediction of protein-carbohydrate complex binding affinity using structural features

Journal Article
Briefings in Bioinformatics. Year: 2021. Volume: 22 , Issue: 4 , Pages: bbaa319 .
Authors: Siva Shanmugam, N.R.; Jino Blessy, J.; Veluraja, K.; Michael Gromiha, M.
DOI 10.1093/bib/bbaa319 Crossref Crossref: 14 Scopus Scopus: 15

PCA-MutPred: Prediction of Binding Free Energy Change Upon Missense Mutation in Protein-carbohydrate Complexes

Journal Article
Journal of Molecular Biology. Year: 2022. Volume: 434 , Issue: 11 , Pages: 167526 .
Authors: Siva Shanmugam, N.R.; Veluraja, K.; Michael Gromiha, M.
DOI 10.1016/j.jmb.2022.167526 Crossref Crossref: 8 Scopus Scopus: 10

Investigations on the binding specificity of β-galactoside analogues with human galectin-1 using molecular dynamics simulations

Journal Article
Journal of Biomolecular Structure and Dynamics. Year: 2022. Volume: 40 , Issue: 20 , Pages: 10094-10105 .
Authors: Jino Blessy, J.; Siva Shanmugam, N.R.; Veluraja, K.; Michael Gromiha, M.
DOI 10.1080/07391102.2021.1939788 Crossref Crossref: 2 Scopus Scopus: 1

Sialic acid analog as inhibitor for human coronavirus OC43-a study by molecular dynamics simulations

Journal Article
Journal of Carbohydrate Chemistry. Year: 2023. Volume: 42 , Issue: 4-6 , Pages: 197-215 .
Authors: Blessy, J.J.; Shanmugam, N.R.S.; Veluraja, K.; Gromiha, M.M.
DOI 10.1080/07328303.2024.2325576 Crossref Crossref: 1

Computational analysis on the effect of mutations for the binding affinity of protein-carbohydrate complexes

Book Chapter
Year: 2024. Pages: 171-190 .
Authors: Siva Shanmugam, N.R.; Lekshmi, S.; Michael Gromiha, M.
DOI 10.1142/9789811293269_0008
Showing 1 to 8 of 21 publications