Ministry of Education
Syed Ibrahim B.
VIDWAN ID: 65069

Dr Syed Ibrahim B.

Male
Assistant Professor | Department of Bioinformatics
Pondicherry Univeristy, Puducherry
Pondicherry
Expertise: Biology
Scopus 57188654412
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13 Publications
0 Projects
100 Scopus Citations
111 CrossRef
16 Years Total Experience
Publications
13 Total
Articles
13
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Scopus Scopus
100 Citations
6 h-index
CrossRef CrossRef
111 Citations
6 h-index
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Assistant Professor
Sep 2010 – Present
Pondicherry Univeristy, Puducherry | Department of Bioinformatics
Biological Sciences
Biology

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Scholarly Publications

Structural insights into TLR4 activation by SARS-CoV-2 spike protein: implications for inflammatory response modulation

Journal Article
Molecular Diversity. Year: 2026. Volume: 30 , Issue: 3 , Pages: 4043-4057 .
Authors: Priya Prakasam; Thripthi Nagesh Shenoy; Abdul Ajees Abdul Salam; Syed Ibrahim Basheer Ahamed
DOI 10.1007/s11030-025-11347-8 Crossref Crossref: 4 Scopus Scopus: 4

Computational insights into TLR4/MD2 interactions with dengue NS1 proteins: Serotype-specific binding and immune response

Open Access
Journal Article
Computational Biology and Chemistry. Year: 2026. Volume: 120 .
Authors: Priya Prakasam; Thripthi Nagesh Shenoy; Abdul Ajees Abdul Salam; Syed Ibrahim Basheer Ahamed
DOI 10.1016/j.compbiolchem.2025.108747 Crossref Crossref: 1 Scopus Scopus: 1

Structural impact of pathogenic SNPs on β-tubulin using molecular dynamics study

Journal Article
Journal of Biomolecular Structure and Dynamics. Year: 2023. Volume: 41 , Issue: 17 , Pages: 8230-8240 .
Authors: Ummul Halilunnisa Mansoor Hussain; Syed Ibrahim Basheer Ahamed
DOI 10.1080/07391102.2022.2130986 Scopus Scopus: 1

The pathogenic effect of SNPs on structure and function of human TLR4 using a computational approach

Journal Article
Journal of Biomolecular Structure and Dynamics. Year: 2023. Volume: 41 , Issue: 21 , Pages: 12387-12400 .
Authors: Priya Prakasam; Abdul Ajees Abdul Salam; Syed Ibrahim Basheer Ahamed
DOI 10.1080/07391102.2023.2166998 Crossref Crossref: 10 Scopus Scopus: 8

Computational investigations of indanedione and indanone derivatives in drug discovery: Indanone derivatives inhibits cereblon, an E3 ubiquitin ligase component

Journal Article
Computational Biology and Chemistry. Year: 2022. Volume: 101 .
Authors: Upendra Nayek; Syed Ibrahim Basheer Ahamed; Ummul Halilunnisa Mansoor Hussain; Mazhuvancherry Kesavan Unnikrishnan; Abdul Ajees Abdul Salam
DOI 10.1016/j.compbiolchem.2022.107776 Crossref Crossref: 5 Scopus Scopus: 5

The pathogenicity, structural and functional exploration of human HMGB1 single nucleotide polymorphisms using in silico study

Journal Article
Journal of Biomolecular Structure and Dynamics. Year: 2020. Volume: 38 , Issue: 15 , Pages: 4471-4482 .
Authors: P. Santhiya; A. Christian Bharathi; B. Syed Ibrahim
DOI 10.1080/07391102.2019.1682048 Crossref Crossref: 5 Scopus Scopus: 2

In Silico Characterization of B Cell and T Cell Epitopes for Subunit Vaccine Design of Salmonella typhi PgtE: A Molecular Dynamics Simulation Approach

Journal Article
Journal of Computational Biology. Year: 2019. Volume: 26 , Issue: 2 , Pages: 105-116 .
Authors: Gopinath Samykannu; Princy Vijayababu; Christian Bharathi Antonyraj; Perumal Perumal; Sundarabaalaji Narayanan; Syed Ibrahim Basheer Ahamed; Jeyakumar Natarajan
DOI 10.1089/cmb.2018.0010 Crossref Crossref: 15 Scopus Scopus: 12

B-cell and T-cell epitope identification with stability analysis of AI-2 import ATP-binding cassette LsrA from S. typhi –In silico approach

Journal Article
Microbial Pathogenesis. Year: 2018. Volume: 123 , Pages: 487-495 .
Authors: Princy Vijayababu; Gopinath Samykannu; Christian Bharathi Antonyraj; SundaraBaalaji Narayanan; Syed Ibrahim Basheer Ahamed; Perumal Perumal; Shanmughavel Piramanayagam
DOI 10.1016/j.micpath.2018.08.012 Crossref Crossref: 3 Scopus Scopus: 2
Showing 1 to 8 of 13 publications